CDS

Accession Number TCMCG006C12943
gbkey CDS
Protein Id XP_022563697.1
Location join(37879365..37879462,37882459..37882537,37882602..37882717,37882873..37882923,37883071..37883190,37883292..37883411,37883485..37883620,37883775..37883945,37884077..37884232,37884354..37884460,37884570..37884660,37884744..37884885,37884992..37885151,37885292..37885408,37885526..37885889)
Gene LOC106415698
GeneID 106415698
Organism Brassica napus

Protein

Length 675aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022707976.1
Definition probable rhamnogalacturonate lyase B isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Polysaccharide lyase family 4, domain II
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGAAACTCGGAGCTCCGAGAAAGAAGTCGGGTTGGGTTATGCTCCAAGTTCTTCTTCTGCATCTCCTTGTTCAAAGTGTTCATTCTCAGAACTCACGAAACAAACTAAACATCACAAATCCTGGACAAAGTATACCAGGCTTAGCAGTTCAGCTAAGGAGAGTTAGTAATGAGAAGGTGGTAGTTGATAATGGTATTATTCAAGTTACTTTCTCGAGCCCACAAGGTTTGATAACTGGAATCAAATATAATGGCATCGATAACGTGTTGGACGACGAAATTGACGATCGTGGGTATTGGGACGTAGTATGGTATGAACCGGAAAAGGCATTGGAAATTGACAAACTAGAAGGAACTAAATTCGAAATCATAACTCAGAACGAAGAACAAGTTGAAATTTCATTTACAAGGACGTGGACGATCTCGAAACGTGGCTCCTTGGTCCCCCTTAACGTAGATAAAAGGTACATTATTCGAACTGGTGTCTCCGGAATATACATGTACGGTATATTAGAGAGGTTAGAAGATTGGCCCGACGTGGACATGGACCAGATTAGGATCGTTTTCAAGCTCAACCCCAAAAAATTTGATTTCATGGCGATATCTGATGACCGGCAGAGAAGCATGCCATCCATGGCGGATCGAGACAATGCTAAGATATTAGCTTACAGAGAAGCTGTTCTCTTGACAAACCCGAAGAACCCTATGTTTAAAGGAGAGGTGGACGATAAGTATATGTACTCAATGGAAGACAAAGACAACAACGTTCATGGTTGGATCTCGTCGGACCCACCGGTTGGGTTTTGGATGATAACTCCAAGCGATGAATTCCGACTTGGTGGGCCCATCAAGCAAGACCTCACCTCTCACGCGGGACCCATCACCCTGTCCATGTTTACGAGCACTCATTACGCGGGGAAAGAGATGAGAATGGATTATAGAAATGGAGAGCCATGGAAGAAGGTTTTTGGACCTGTCTTGGCTTATCTCAACTCTGTCTCTCCCAAAGATTCCACTCTTCGTCTCTGGAAAGATGCTAAACGACAGATGGCTGAAGAAGTTAGAAGCTGGCCTTATGATTTTGTAAATTCAGAAGACTATCCTCTTTCTCATCAGAGAGGAACGATCGAAGGTCAATTCTATATCAAAGACCGATACGTGTCAAGACTAAATATATATGGGAAATTTGCTTTTGTTGGTTTGGCACCATGTGGTGAAGCCGGTTCATGGCAAACCGAATCAAAGGGGTATCAGTTTTGGACGAAAGCTGACAGAAAAGGAAGATTCATAATAGAGAATGTGAGGGCAGGCAATTATAGTCTCTACGCATGGGGTTATGGTTTTATCGGTGACTATAAATATGAACAAAACATTACCATCACTCCAGGTAGTCAGATGAATGTAGGGCCTATAGTGTATGAGCCACCTAGAAACGGTCCAACGTTGTGGGAAATAGGTGTACCGGACCGAACAGCCGGAGAGTTCTATATACCGGATCCTTATCCTACACTTATGAATAAGCTTTATGTTAACCCACTTCAAGACAGATTTAGACAATATGGATTATGGGATCGTTACGCAGATTTATACCCTCAAAACGATCTTGTCTACACAGTCGGTGTTAGTGATTATAAAAGAGATTGGTTCTTTGCACATGTAACCAGAAATGCTGGAAATAATACATACGATTCAACGACATGGCAAATAATATTTAACCTGGAAAACGTGAACCGTGTCGGTCTCTACACGCTCAGAATAGCTCTAGCCTCAGCTGCTGATTCCGAGTTACAAGTTCGGGTCAACAATCCGAAATCCGATCATATTTTCACGACCGGTTTAATCGGAAAAGACAATGCCATTGCAAGACATGGGATTCATGGGTTATATAGATTGTATAGTATCAACGTTGCTGGAGATTTACTAAGTGTTGGTGATAATACCATATATTTAACTCAATCGAGAAGTGTAGGACCTTTTCAAGGTGTTATGTATGATTATATTCGTCTTGAAAGTCCTTTTACAACTTGA
Protein:  
MKLGAPRKKSGWVMLQVLLLHLLVQSVHSQNSRNKLNITNPGQSIPGLAVQLRRVSNEKVVVDNGIIQVTFSSPQGLITGIKYNGIDNVLDDEIDDRGYWDVVWYEPEKALEIDKLEGTKFEIITQNEEQVEISFTRTWTISKRGSLVPLNVDKRYIIRTGVSGIYMYGILERLEDWPDVDMDQIRIVFKLNPKKFDFMAISDDRQRSMPSMADRDNAKILAYREAVLLTNPKNPMFKGEVDDKYMYSMEDKDNNVHGWISSDPPVGFWMITPSDEFRLGGPIKQDLTSHAGPITLSMFTSTHYAGKEMRMDYRNGEPWKKVFGPVLAYLNSVSPKDSTLRLWKDAKRQMAEEVRSWPYDFVNSEDYPLSHQRGTIEGQFYIKDRYVSRLNIYGKFAFVGLAPCGEAGSWQTESKGYQFWTKADRKGRFIIENVRAGNYSLYAWGYGFIGDYKYEQNITITPGSQMNVGPIVYEPPRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYVNPLQDRFRQYGLWDRYADLYPQNDLVYTVGVSDYKRDWFFAHVTRNAGNNTYDSTTWQIIFNLENVNRVGLYTLRIALASAADSELQVRVNNPKSDHIFTTGLIGKDNAIARHGIHGLYRLYSINVAGDLLSVGDNTIYLTQSRSVGPFQGVMYDYIRLESPFTT